Title:
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Towards an understanding of microbe-microbe and microbe-environment interactions : implications for biocontrol of potato pathogens
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potatoes are one of the most important crops in the world. For the protection of environmental and
human health (by reducing pesticide inputs), to avoid problems associated with pesticide-resistant
crop-plant pathogens and to safeguard global food security, there is a pressing need to develop novel,
eco-friendly, and cost-effective control methods for pathogens. The potato-pathogens Phytophthora
infestans (late-blight which infects the plant above-soil) and Fusarium species (which typically cause
dry-rot of stored tubers) can cause loses of 100 and 25% respectively. The current study was carried
out to explore fundamental aspects of microbial ecology that can inform biological strategies for the
control of potato-pathogenic microbes. The Introduction (Chapter 1) discusses what is currently known
about microbial interactions and solute activities of biologically relevant substances, and outlines
current control methods for potato pathogens and current biological controls. Chapter 2 explores the
hypothesis that some microbial species can dominate specific habitats, characterizes and defines open
habitats of microbes, and determines the traits that can enable some species to dominate open
habitats. Chapter 3 reports the development and validation of a new, spectrophotometric method for
the quantification of the macromolecule-destabilising (chaotropic) or stabilising (kosmotropic) activities
of diverse substances; the method was tested via application to the characterisation of a newly
discovered, deep-sea brine lake - Lake Kryos - which has high concentrations of the chaotropic salt,
magnesium chloride. Chapter 4 determines the implications of chaotropicity in two types of
biotechnological process: product toxicity in biofuel fermentations and mode-of-action of antifungal
compounds. Chapter 5 reports a sampling campaign to obtain ecophysiologically diverse
potato-associated microbes, and the development of a protocol to quantify their inhibitory potency
against potato-pathogenic microbes. Chapter 6 determines (both qualitatively and quantitatively) the
nature of interactions between P. infestans or Fusarium species against and the potential biocontrol
agents in relation to inhibitory potency and whether the latter can also promote the multiplication of
potato pathogens.
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